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The two web browsers for the integrated whole genome shotgun assembly (EnsEMBL) and the finished clones (Vega) can be entirely customized to your needs. If you enable cookies, the customization will be remembered and applied to your next session. In order to do this, please try the yellow bar in Ensembl (it's blue in Vega) within Detailed View on the ContigView pages as depicted below.
By clicking any of the options left of arrows you will be shown a list of selectable options to configure the display to your needs. You can further refine the display by chosing to collapse or decollapse certain feature tracks ( click -/+ left of tracks). If you are not sure what a certain feature track represents, simply click its title and you will get a popup window with exaplanations. Also, any feature displayed within the two browsers can be clicked in order to retrieve more information about it. The mouse overs can be switched off using 'Épopup on click' under 'Decorations' although it should be pointed out that they offer helpful shortcuts to further information.