| Gene name: | Class: | Start/End: | Length: | Molecular weight: | |
|---|---|---|---|---|---|
| ----- | Cj0541 | 1.G.11 | 503037 / 503930 | 894 bp / 297 aa | 33934 Da |
| Product: | |||||
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polyprenyl synthetase |
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| Description: | |||||
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Cj0541, probable polyprenyl synthetase, len: 297 aa; similar to many e.g. ISPB_ECOLI octaprenyl-diphosphate synthase (EC 2.5.1.-) (323 aa), fasta scores; opt: 514 z-score: 753.9 E(): 0, 35.2% identity in 281 aa overlap, IDSA_METTM bifunctional short chain isoprenyl diphosphate synthase (324 aa), fasta scores; opt: 549 z-score: 676.0 E(): 2.3e-30, 36.5% identity in 277 aa overlap, and GGPP_SULAC geranylgeranyl pyrophosphate synthetase (330 aa), fasta scores; opt: 330 z-score: 653.2 E(): 4.4e-29, 32.9% identity in 292 aa overlap. 44.6% identity to HP0240. Also similar to Cj1644 (27.6% identity in 268 aa overlap). Contains PS00723 and PS00444 Polyprenyl synthetases signatures 1 and 2, and Pfam match to entry PF00348 polyprenyl_synt, Polyprenyl synthetases, score 153.40, E-value 3.8e-42 |
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| Translation: | |||||
VQKIDELIKQ
FLQELGYEPI
LNMLSNVKSG
KKLRSKLLLA
IADESEIAFK
ICAAIELIHL
ASLLHDDIID
ESELRRGARS
VNAEFGTKNA
LMLGDILYSK
AFYELSKMDA
RFASIISDAV
VKLAIGELMD
VDLGEKFNIN
KEAYLKMIYN
KTAVLIEASA
RCGAILAGLY
EKDFAEYGKN
LGLAFQMIDD
ILDIKSDEKI
LGKPAMNDFK
EGKTTLPYIY
LYENLQEQDR
IYLQTLFKKD
LNENEKEWLK
TKFEEQKALE
KAILEAKTYA
KKARKAIEKY
DNNKLNDIIK
AMIDREF
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| Pfam domains present: | |||||
Pfam match to entry PF00348 polyprenyl_synt, Polyprenyl synthetases, score 153.40, E-value 3.8e-42
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| Prosite patterns present: | |||||
PS00723 Polyprenyl synthetases signature 1
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Last Modified Thu Oct 23 15:36:40 2003
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