C.jejuni

Gene name:		Class:	Start/End:	Length:	Molecular weight:
nrdA	Cj0024	1.F.3	29726 / 32095	2370 bp / 789 aa	90053 Da
Product:
ribonucleoside-diphosphate reductase alpha chain
Description:
Cj0024, nrdA, ribonucleoside-diphosphate reductase alpha chain, len: 789 aa; similar to e.g. RIR3_YEAST ribonucleoside-diphosphate reductase large chain 2 (869 aa), fasta scores; opt: 909 z-score: 1663.2 E(): 0, 33.0% identity in 813 aa overlap, and RIR1_ECOLI ribonucleoside-diphosphate reductase 1 alpha chain (EC 1.17.4.1) (761 aa), fasta scores; opt: 795 z-score: 1160.2 E(): 0, 28.5% identity in 811 aa overlap. 68.9% identity to HP0680. Contains PS00089 Ribonucleotide reductase large subunit signature and 3x Pfam match to entry PF00317 ribonucleo_red, Ribonucleotide reductase, scores 371.50, E-value 5.1e-139, 133.70, E-value 4.5e-50 and 44.10, E-value 1.5e-16
Translation:
MKVIKRNGRT EELDVSKIKK CTSDAVKDLE GVNLSELELD AKIQFRDGIS TEEIQKTLIK TAVDKIDIDC PNWTFVAARL FLFDLYKKVN GMNRYNHLRE YFQKGEKEGR ILLGLKEKYD LDDLNAYIKP ERDMQFTYLG IKTLYDRYLI KDSKGMPIEL PQQMFMAIAM FLAQNEFNPQ EWAKKFYDLI SKFELMLATP TLSNARTTRH QLSSCYIGST PDNIEGIFDS YQEMALLSKF GGGIGWDWSK VRAMGGSIDG HKNAAGGIIP FLKITNDIAV AVDQLGTRKG AIAVYIEPWH MDISDFIDLR KNSGEERRRA HELFPALWIN DLFMKRVRAN DKWTLFDPAD TADLCDLYGE AFEKRYEEYE KDESITKEIV EAKELWKKIL LNYFETGLPF LCFKDSANRA NPNAHVGIIR SSNLCTEIFQ NTEPNYYQIK VVFENGDELH FDEEQKVVID GGYEKPAKKI STLDSIEGNK VYIVEKYKND GKTAVCNLAS INLSKVYTKE DIERVVPTAI RMLDNVIDLN FYPHRKVKDT NLKSRAIGLG VMGEAQMLAE AKIHWGSDEH LNKIDEIMEQ ISFEAINASS NLALEKGSYE DFEGSNWSKG IFPIDVASPK AKALTLREGL FDQSECDWVK LREKVKKDGM RNGYLMAIAP TSSISILVGT TQTIEPVYKR KWFEQNLSGM IPVVVPNLSL DTWQYYTPAY ELDQKILVKA AAVRGKWIDQ GQSLNIFLSL DKASGGYLNE IYQLAWELGV KSTYYLRSES PDSEKVNVAD RSIECEGCQ
Pfam domains present:
`Pfam match to entry PF00317 ribonucleo_red, Ribonucleotide reductase, score 371.50, E-value 5.1e-139 Pfam match to entry PF00317 ribonucleo_red, Ribonucleotide reductase, score 133.70, E-value 4.5e-50 Pfam match to entry PF00317 ribonucleo_red, Ribonucleotide reductase, score 44.10, E-value 1.5e-16`
Prosite patterns present:
`PS00089 Ribonucleotide reductase large subunit signature`

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Last Modified Thu Oct 23 15:36:18 2003

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