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C. albicans pilot project

The Sanger Institute carried out a pilot sequencing project on the Candida albicans strain 1161 genome in collaboration with Prof. Duncan Shaw at the University of Aberdeen. A set of 10 cosmids was sequenced for this pilot project. The project was funded by Beowulf Genomics.

For more details on the mapping project see

A Candida albicans Genome Project: Cosmid Contigs, Physical Mapping, and Gene Isolation.
Fungal Genetics and Biology 21: 308-314, 1997 Article No. FG970983
Evelyn Tait, Moyra C. Simon, Susan King, Alistair J. Brown, Neil A. R. Gow and Duncan J. Shaw

For more details on the pilot project see

Prevalence of small inversions in yeast gene order evolution.
Proc Natl Acad Sci U S A 2000 Dec 19;97(26):14433-7
Seoighe C, Federspiel N, Jones T, Hansen N, Bivolarovic V, Surzycki R, Tamse R, Komp C, Huizar L, Davis RW, Scherer S, Tait E, Shaw DJ, Harris D, Murphy L, Oliver K, Taylor K, Rajandream MA, Barrell BG, Wolfe KH.

  Cosmid   Stage or Remark   ID   Accession
Ca38F10 EMBL CAC38F10 AL033502
Ca49C4 EMBL CAC49C4 AL033503
Ca35A5 EMBL CAC35A5 AL033396
Ca16H2 finished
Ca41C10 EMBL CAC41C10 AL033501
Ca20C1 EMBL CAC20C1 AL033391
Ca51G1 redundant
Ca49C10 EMBL CAC49C10 AL033497
Ca2B4 shotgun complete
Enquiries
Sequencing enquiries

Please address all enquiries to Martin Aslett (Pathogen Sequencing Web Master - email: maa@sanger.ac.uk).

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Last Modified Wed Jan 18 13:32:25 2006

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