Colocalization between Treg QTLs and immune GWAS

Visualise the p-values for QTL and GWAS studies across all SNPs in a locus

Colocalisation plot

Coloc associated values

The work presented here is described in this paper. If you plan on using any plots or information please cite this work.

All LD scores are calculated based on the EUR population from 1000G phase 3.

The GWAS summary stats used are: allergic diseases ( ALL ), ankylosing spondylitis ( AS ), asthma ( AST ), celiac disease ( CEL ), multiple sclerosis ( MS ), primary biliary cirrhosis ( PBC ), psoriasis ( PS ), rheumatoid arthritis ( RA ), systemic lupus erythematosus ( SLE ), type 1 diabetes ( T1D ), vitiligo ( VIT ), inflammatory bowel disease, Crohn’s disease and ulcerative colitis ( IBD, CD and UC ).