AncesBin

AncesBin

AncesBin

Overview

AncesBin - Pipeline to bin 10X, HiC, PacBio and ONT reads based on ancestry assemblies.

There are three codes bin10x, binHiC and binLong in the package:

/full/path/to/AncesBin/src/bin10x -nodes <nodes> Input_sorted_bam Input_data_file Output_directory

/full/path/to/AncesBin/src/binHiC -nodes 30 MAT_ref.fasta PAT_ref.fasta Input_read_1.fq.gz Input_read_2.fq.gz Output_head

/full/path/to/AncesBin/src/binLong -nodes 30 MAT_ref.fasta PAT_ref.fasta Input_data_file Output_directory

Authors

Sanger Contributors
External Contributors

Tool Type