Cellular Genetics Informatics | Cellular Genetics

Cellular Genetics Informatics | Cellular Genetics

Cellular Genetics Informatics

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Our Research and Approach

Our team provides efficient access to cutting-edge analysis methods for Cellular Genetics department, which leads a number of world-class research initiatives including the Human Induced Pluripotent Stem Cell Initiative (HIPSCI) and Human Cell Atlas. Our team’s focus is the development and operation of workflows, tools and infrastructure for data analysis that support the department’s research goals.

To run our pipelines we use both batch LSF compute cluster and OpenStack private cloud solutions. We extensively use Kubernetes to orchestrate pipeline on the cloud. To run the pipelines we use both CWL and Nextflow.

Our Documentation

Our GitHub organisation

People

Kiselev, Vladimir
Dr Vladimir Kiselev
Group Leader

Vladimir has a significant experience in RNAseq and scRNAseq analysis. He used to be a PostDoc in Martin Hemberg's group before taking this role.

Research Programmes and Faciltites

Partners and Funders

We provide support for the following Faculty and Associate Faculty Groups at the Sanger Institute:
Internal Partners