GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Weight

The human homologues of the following genes have been identified in "Weight" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
anks1b ANKS1B ENSDARG00000003512 5 Not determined 7
atg4c ATG4C ENSDARG00000044373 1 Not determined 2
atp2a1 ATP2A1 ENSDARG00000020574 3 Not determined 1
atp2a1l ATP2A1 ENSDARG00000035458 4 Normal 1
bcdin3d BCDIN3D ENSDARG00000074111 1 Not determined 2
bdnf BDNF ENSDARG00000018817 1 Not determined 5
chst8 CHST8 ENSDARG00000044577 1 Normal 3
CHST8 (1 of 2) CHST8 ENSDARG00000074560 None Not determined 3
etv5a ETV5 ENSDARG00000069763 3 Not determined 3
fstl5 FSTL5 ENSDARG00000040198 9 Normal 1
fto FTO ENSDARG00000044216 3 Not determined 32
IL1RAP IL1RAP ENSDARG00000091088 2 Not determined 2
im:7147241 SEC16B ENSDARG00000052046 8 Not determined 5
kcne4 KCNE4 ENSDARG00000068257 None Not determined 2
KCTD15 KCTD15 ENSDARG00000058255 None Not determined 5
kctd15a KCTD15 ENSDARG00000045893 None Not determined 5
klhl36 KLHL36 ENSDARG00000030251 4 Not determined 1
LOC100006044 FAIM2 ENSDARG00000039444 None Not determined 4
lta4h LTA4H ENSDARG00000006029 None Not determined 1
mc4r MC4R ENSDARG00000015515 3 2 normal 14
negr1 NEGR1 ENSDARG00000021607 1 Not determined 6
NEGR1 (2 of 2) NEGR1 ENSDARG00000091309 None Not determined 6
ntm NEGR1 ENSDARG00000018065 1 Not determined 6
pbx1a PBX1 ENSDARG00000089610 6 Not determined 2
pcdh15a PCDH15 ENSDARG00000052232 9 Normal 3
pcdh15b PCDH15 ENSDARG00000008127 5 Not determined 3
pigf PIGF ENSDARG00000032780 2 Not determined 1
ppm1h PPM1H ENSDARG00000063684 1 Not determined 2
rad23b RAD23B ENSDARG00000021550 1 Not determined 3
sept9a SEPT9 ENSDARG00000020235 2 Not determined 2
sept9b SEPT9 ENSDARG00000041718 None Not determined 2
sh2b1 SH2B1 ENSDARG00000057679 3 Not determined 4
si:ch1073-376g14.1 ZNF804B ENSDARG00000086290 5 Not determined 4
si:ch211-103i6.5 FASTKD2 ENSDARG00000074031 4 Not determined 2
si:ch211-198i20.2 RASAL2 ENSDARG00000036257 1 Not determined 3
si:ch211-213b8.4 PCDH15 ENSDARG00000095360 None Not determined 3
si:dkey-189g17.3 DGKG ENSDARG00000062696 8 Normal 1
sqrdl SQRDL ENSDARG00000017034 1 Not determined 2
zgc:101011 TMEM18 ENSDARG00000036704 None Not determined 7
zgc:101872 ANAPC4 ENSDARG00000032237 2 Normal 1
zgc:110143 FAIM2 ENSDARG00000038784 4 Not determined 4
zgc:123349 RAD23B ENSDARG00000058984 None Not determined 3
zgc:153912 MGAT1 ENSDARG00000036065 None Not determined 3
zgc:158824 PBX1 ENSDARG00000089550 2 Not determined 2
zgc:171223 CCDC99 ENSDARG00000078054 3 Not determined 1
zgc:63986 CYP20A1 ENSDARG00000006040 None Not determined 1
zgc:66030 MGAT1 ENSDARG00000012407 2 Not determined 3

The following reported genes could not be linked automatically to a zebrafish gene:

  • AIF1
  • C12orf55
  • CRIPT
  • NCR3
  • RPL13AP17
  • SFRS10
  • SFRS10
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