GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

QT interval (interaction)

The human homologues of the following genes have been identified in "QT interval (interaction)" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
brn1.2 POU3F2 ENSDARG00000070220 None Not determined 3
camk1d CAMK1D ENSDARG00000017446 2 Not determined 4
ccnd2a CCND2 ENSDARG00000051748 None Not determined 7
ccnd2b CCND2 ENSDARG00000070408 None Not determined 7
CREBBP (3 of 3) CREBBP ENSDARG00000060976 1 Not determined 3
crebbpa CREBBP ENSDARG00000061308 5 Not determined 3
crebbpb CREBBP ENSDARG00000063102 3 Normal 3
dph5 DPH5 ENSDARG00000011931 None Not determined 1
ep300a CREBBP ENSDARG00000062380 None Not determined 3
gnal GNAL ENSDARG00000045415 1 Normal 1
GNAL (1 of 2) GNAL ENSDARG00000075850 None Not determined 1
LOC100333421 LRFN5 ENSDARG00000039500 2 Not determined 2
pou3f2 POU3F2 ENSDARG00000076262 1 Not determined 3
ros1 ROS1 ENSDARG00000039893 None Not determined 2
sc:d0343 LRFN5 ENSDARG00000071230 None Not determined 2
sc:d0350 LRFN5 ENSDARG00000079396 1 Not determined 2
si:ch211-103i6.5 FASTKD2 ENSDARG00000074031 4 Not determined 2
zgc:103502 CCND2 ENSDARG00000027391 None Not determined 7
zgc:172282 LRFN5 ENSDARG00000075231 1 Not determined 2
zgc:172284 CAMK1D ENSDARG00000074905 4 Not determined 4

The following reported genes could not be linked automatically to a zebrafish gene:

  • AACP
  • ADAMTSL1
  • CNTNAP2
  • FBX028
  • GABPAP
  • LOC647020
  • RPSAP1
  • SKCG-1
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