GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Pancreatic cancer

The human homologues of the following genes have been identified in "Pancreatic cancer" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
arl4ca ARL4C ENSDARG00000057606 1 Not determined 1
arl4cb ARL4C ENSDARG00000032708 None Not determined 1
bach1 BACH1 ENSDARG00000002196 None Not determined 2
clptm1l CLPTM1L ENSDARG00000021048 None Not determined 9
dab2 DAB2 ENSDARG00000031761 1 Not determined 3
dpp6b DPP6 ENSDARG00000024744 4 Not determined 5
fam91a1 FAM91A1 ENSDARG00000003320 1 Not determined 2
foxq1 FOXQ1 ENSDARG00000055395 None Not determined 2
foxq1l FOXQ1 ENSDARG00000030896 3 Not determined 2
foxq2 FOXQ1 ENSDARG00000071394 1 Not determined 2
GRID1 (2 of 2) GRID1 ENSDARG00000044161 3 Not determined 4
GTF2H1 (2 of 2) GTF2H1 ENSDARG00000095079 1 Not determined 2
klf12a KLF12 ENSDARG00000015312 2 Not determined 3
klf12b KLF12 ENSDARG00000032197 None Not determined 3
klf3 KLF12 ENSDARG00000015495 1 Not determined 3
klf5a KLF5 ENSDARG00000015506 1 Not determined 1
klf5b KLF5 ENSDARG00000062106 1 Not determined 1
LOC100151589 GRID1 ENSDARG00000070511 1 Not determined 4
LOC100330316 BICD1 ENSDARG00000074357 2 Not determined 4
LOC793756 GRID1 ENSDARG00000074583 4 Normal 4
myo1d MYO1D ENSDARG00000036863 6 Not determined 3
NP_001009918.2 TFRC ENSDARG00000012552 None Not determined 3
nr5a2 NR5A2 ENSDARG00000042556 4 Not determined 1
nr5a5 NR5A2 ENSDARG00000039116 2 Not determined 1
park2 PARK2 ENSDARG00000021555 1 Not determined 4
prpsap2 PRPSAP2 ENSDARG00000019326 None Not determined 1
RNF149 RNF149 ENSDARG00000089767 None Not determined 1
SBF2 SBF2 ENSDARG00000059460 6 Not determined 1
si:ch211-123f21.1 PARK2 ENSDARG00000091973 None Not determined 4
si:ch211-136i24.1 BICD1 ENSDARG00000079496 5 Normal 4
si:ch211-232k18.1 DPP6 ENSDARG00000076826 2 Not determined 5
si:ch211-240g9.1 FAM19A5 ENSDARG00000068100 1 Not determined 1
si:ch211-251b21.1 GRID1 ENSDARG00000007275 1 Not determined 4
si:ch211-254n4.3 FAM19A5 ENSDARG00000020292 2 Not determined 1
si:dkey-238f9.1 FAM19A5 ENSDARG00000079446 None Not determined 1
si:dkey-27f18.1 FAM19A5 ENSDARG00000069160 None Not determined 1
si:dkey-3l8.7 FAM19A5 ENSDARG00000077626 None Not determined 1
si:dkey-60a16.3 ARID1B ENSDARG00000092503 2 Not determined 3
slc1a1 SLC1A1 ENSDARG00000020212 None Not determined 1
tfr1a TFRC ENSDARG00000058784 1 Not determined 3
tfr1b TFRC ENSDARG00000077372 None Not determined 3
THSD7B (2 of 2) THSD7B ENSDARG00000061497 4 Not determined 3
thsd7ba THSD7B ENSDARG00000095022 2 Not determined 3
unc5a BAI3 ENSDARG00000074543 1 Not determined 4
v2r1 PRLHR ENSDARG00000044900 None Not determined 1
zgc:136739 BACH1 ENSDARG00000062553 None Not determined 2
zgc:136851 KLF5 ENSDARG00000018757 2 Not determined 1
zgc:162200 BICD1 ENSDARG00000079934 1 Not determined 4
zgc:163001 BAI3 ENSDARG00000059832 3 Not determined 4
zgc:63948 NDFIP2 ENSDARG00000033928 1 Not determined 2
zgc:92126 GTF2H1 ENSDARG00000026701 3 Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • ABO
  • c18orf1
  • LOC284998
  • LOC387933
  • LOC730242
  • LOC731559
  • MIPEPP2
  • RNF43
  • RNF5P1
  • TFF1
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