GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Non-alcoholic fatty liver disease histology (other)

The human homologues of the following genes have been identified in "Non-alcoholic fatty liver disease histology (other)" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
CACNA2D1 (2 of 3) CACNA2D1 ENSDARG00000040406 3 Not determined 2
cacna2d1a CACNA2D1 ENSDARG00000014804 6 Not determined 2
COL13A1 COL13A1 ENSDARG00000091398 2 Not determined 1
efcab4b EFCAB4B ENSDARG00000045758 None Not determined 3
FARP1 (2 of 2) FARP1 ENSDARG00000063695 1 Not determined 5
gc GC ENSDARG00000089310 1 Not determined 5
lcp1 LCP1 ENSDARG00000023188 None Not determined 1
LCP1 (2 of 2) LCP1 ENSDARG00000088098 1 Not determined 1
LOC100330395 EFCAB4B ENSDARG00000068231 None Not determined 3
LOC100332844 EHBP1L1 ENSDARG00000057353 16 2 normal 1
LOC794003 ZP4 ENSDARG00000073976 5 Not determined 2
ltbp3 LTBP3 ENSDARG00000035682 4 Not determined 2
NP_001075101.1 ST8SIA1 ENSDARG00000055728 None Not determined 1
obscn PALLD ENSDARG00000043309 7 Normal 2
si:ch211-235f1.1 FARP1 ENSDARG00000074381 4 Not determined 5
si:ch73-105b23.1 LTBP3 ENSDARG00000087558 4 Normal 2
si:ch73-107c13.2 FDFT1 ENSDARG00000060260 2 Not determined 1
si:dkey-266j7.2 CACNA2D1 ENSDARG00000073752 2 Not determined 2
si:dkey-27a13.1 COL13A1 ENSDARG00000093421 2 Not determined 1
si:dkey-30j22.1 LTBP3 ENSDARG00000042829 12 Not determined 2
si:dkey-48m5.3 EHBP1L1 ENSDARG00000079895 5 Not determined 1
si:dkey-5g14.1 SLC46A3 ENSDARG00000079933 None Not determined 2
slc46a3 SLC46A3 ENSDARG00000077313 1 Not determined 2
st8sia1 ST8SIA1 ENSDARG00000074347 None Not determined 1
zgc:174356 SLC46A3 ENSDARG00000088263 1 Not determined 2
zp2 ZP4 ENSDARG00000086352 1 Not determined 2
zp2 ZP4 ENSDARG00000089966 None Not determined 2
zp2.2 ZP4 ENSDARG00000091737 None Not determined 2
zp2.3 ZP4 ENSDARG00000090237 None Not determined 2
zp2.5 ZP4 ENSDARG00000086522 None Not determined 2
zp2.6 ZP4 ENSDARG00000091409 None Not determined 2
zp2l1 ZP4 ENSDARG00000055415 1 Not determined 2
zp2l2 ZP4 ENSDARG00000004898 None Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • 23231
  • A8
  • C10orf122
  • DDX60L
  • LPPR4
  • MACROD2
  • PZP
  • SLC38
  • SLC9A9
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