GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

LDL cholesterol

The human homologues of the following genes have been identified in "LDL cholesterol" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
apob APOB ENSDARG00000042780 9 Not determined 17
apobl APOB ENSDARG00000022767 11 Not determined 17
apoeb APOE ENSDARG00000040295 1 Not determined 42
celsr1a CELSR2 ENSDARG00000069185 8 Not determined 17
CELSR2 CELSR2 ENSDARG00000088231 4 Not determined 17
celsr2l CELSR2 ENSDARG00000019726 2 Not determined 17
hmgcra HMGCR ENSDARG00000052734 4 Not determined 9
hmgcrb HMGCR ENSDARG00000059301 None Not determined 9
si:dkey-30k22.7 CELSR2 ENSDARG00000037286 4 Not determined 17
si:dkeyp-106c3.3 APOB ENSDARG00000093159 None Not determined 17
si:dkeyp-88f5.1 APOB ENSDARG00000075016 5 Not determined 17
zgc:110064 APOE ENSDARG00000086370 1 Not determined 42

The following reported genes could not be linked automatically to a zebrafish gene:

  • APOC1
  • APOC1
  • APOC2
  • APOC4
  • PSRC1
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