GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Dialysis-related mortality

The human homologues of the following genes have been identified in "Dialysis-related mortality" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
abca4a ABCA4 ENSDARG00000057169 2 Not determined 2
calm2b CALM2 ENSDARG00000044537 None Not determined 1
calm3a CALM2 ENSDARG00000015050 None Not determined 1
calm3a CALM2 ENSDARG00000021811 1 Not determined 1
calm3a CALM2 ENSDARG00000034187 1 Not determined 1
calm3a CALM2 ENSDARG00000074057 1 Not determined 1
calm3b CALM2 ENSDARG00000031427 None Not determined 1
cpsf2 CPSF2 ENSDARG00000028971 None Not determined 3
D3J0E8_DANRE GCNT1 ENSDARG00000086781 None Not determined 1
dguok DGUOK ENSDARG00000051983 None Not determined 2
dguok DGUOK ENSDARG00000075395 None Not determined 2
epha7 EPHA7 ENSDARG00000004635 5 Not determined 2
esrrd ESRRG ENSDARG00000015064 None Not determined 4
esrrga ESRRG ENSDARG00000004861 3 Not determined 4
esrrgb ESRRG ENSDARG00000011696 None Not determined 4
GAS2 (2 of 2) GAS2 ENSDARG00000036152 1 Not determined 1
gpatch2 GPATCH2 ENSDARG00000031064 1 Not determined 2
has2 HAS2 ENSDARG00000036987 2 Not determined 2
irx1b IRX3 ENSDARG00000056594 1 Not determined 1
irx3a IRX3 ENSDARG00000052947 1 Not determined 1
irx3b IRX3 ENSDARG00000031138 1 Not determined 1
irx5a IRX5 ENSDARG00000034043 1 Not determined 1
irx5b IRX5 ENSDARG00000074070 1 Not determined 1
KLHL29 (1 of 2) KLHL29 ENSDARG00000087688 4 Not determined 3
LOC100334314 KLHL29 ENSDARG00000043799 5 Not determined 3
LOC557312 GAS2 ENSDARG00000001259 2 Not determined 1
LOC568788 ADAMTS3 ENSDARG00000060127 4 Not determined 4
macc1 SH3BP4 ENSDARG00000040717 None Not determined 2
nrg1 NRG1 ENSDARG00000068458 1 Not determined 6
NR_023336.1 RAPGEF5 ENSDARG00000075271 None Not determined 2
pcsk2 PCSK2 ENSDARG00000019451 None Not determined 4
pdzrn3 PDZRN3 ENSDARG00000073869 2 Not determined 1
sh3bp4a SH3BP4 ENSDARG00000020000 1 Not determined 2
si:ch211-195i6.4 ABCA4 ENSDARG00000062661 8 Not determined 2
si:ch211-220a11.1 TET3 ENSDARG00000062646 3 Not determined 2
si:ch211-87l8.1 SLC24A4 ENSDARG00000067509 3 Not determined 4
si:ch73-21k16.4 GPATCH2 ENSDARG00000095429 None Not determined 2
si:ch73-335m24.5 SLC24A4 ENSDARG00000036383 2 Not determined 4
si:dkey-233k19.1 RAPGEF5 ENSDARG00000074307 5 Not determined 2
si:dkey-31e3.5 PDZRN3 ENSDARG00000073757 2 Not determined 1
si:dkey-57b6.3 SH3BP4 ENSDARG00000030104 2 Not determined 2
wu:fk30a05 RIN3 ENSDARG00000077618 3 Not determined 2
zgc:112072 SLC24A4 ENSDARG00000015425 1 Not determined 4
zgc:158828 DHX35 ENSDARG00000063419 1 Not determined 2
zgc:174864 COX18 ENSDARG00000079680 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • ADAMTS5
  • ADAMTS5
  • IL6
  • LOC339568
  • LOC729980
  • NCRNA00113
  • NCRNA00113
  • RPSAP9
  • SVIP
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