GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Cardiac structure and function

The human homologues of the following genes have been identified in "Cardiac structure and function" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
GRID1 (2 of 2) GRID1 ENSDARG00000044161 3 Not determined 4
hmga2 HMGA2 ENSDARG00000069912 None Not determined 18
LOC100151589 GRID1 ENSDARG00000070511 1 Not determined 4
LOC100333141 PPIC ENSDARG00000053219 1 Not determined 1
LOC100334833 HMGA2 ENSDARG00000091038 None Not determined 18
LOC793756 GRID1 ENSDARG00000074583 4 Normal 4
loxl1 LOXL1 ENSDARG00000054451 8 Not determined 2
palmd PALMD ENSDARG00000034321 2 Not determined 1
Q5SPS0_DANRE C6orf204 ENSDARG00000093883 2 Not determined 5
SGSM2 SGSM2 ENSDARG00000063307 1 Not determined 2
si:ch211-112m17.3 C6orf204 ENSDARG00000020777 3 Not determined 5
si:ch211-153l6.5 PALMD ENSDARG00000001913 1 Not determined 1
si:ch211-251b21.1 GRID1 ENSDARG00000007275 1 Not determined 4
si:dkey-48h7.2 PDE3A ENSDARG00000004227 None Not determined 7
slc25a46 SLC25A46 ENSDARG00000035181 1 Not determined 1
slc35f1 SLC35F1 ENSDARG00000053003 None Not determined 6
smg6 SMG6 ENSDARG00000075957 2 Not determined 5
tsr1 TSR1 ENSDARG00000007744 3 Not determined 1
wwox WWOX ENSDARG00000007614 4 Not determined 9
zgc:158252 PALMD ENSDARG00000071215 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • CCDC100
  • PLN
  • SRR
Short-link