GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Calcium levels

The human homologues of the following genes have been identified in "Calcium levels" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
cdkn1b CDKN1C ENSDARG00000054271 None Not determined 1
cdkn1bl CDKN1C ENSDARG00000029018 None Not determined 1
ift172 IFT172 ENSDARG00000041870 1 Not determined 2
LOC100332162 FNDC4 ENSDARG00000009949 None Not determined 4
LOC100333044 GCKR ENSDARG00000086620 None Not determined 39
LOC100333062 WDR81 ENSDARG00000079702 7 Not determined 2
LOC560607 CASR ENSDARG00000013649 1 Not determined 4
nap1l4a NAP1L4 ENSDARG00000070560 1 Not determined 1
nap1l4b NAP1L4 ENSDARG00000068868 None Not determined 1
NP_997957.1 CDKN1C ENSDARG00000088081 None Not determined 1
phlda2 PHLDA2 ENSDARG00000042874 None Not determined 1
prpf8 PRPF8 ENSDARG00000026180 2 Not determined 1
sag SAG ENSDARG00000038378 2 Not determined 2
serpinf1 SERPINF1 ENSDARG00000069048 1 Not determined 1
serpinf2 SERPINF2 ENSDARG00000076448 1 Not determined 2
si:ch211-161h7.6 CSTA ENSDARG00000028164 None Not determined 1
si:ch211-161h7.7 KPNA1 ENSDARG00000016360 5 Not determined 1
si:dkey-71h2.1 FNDC4 ENSDARG00000043396 None Not determined 4
slc22a18 SLC22A18 ENSDARG00000052271 3 Not determined 2
smyd4 SMYD4 ENSDARG00000060983 2 Not determined 1
wdr5 WDR5B ENSDARG00000016903 1 Not determined 1
zgc:153129 CSTA ENSDARG00000045980 None Not determined 1
zgc:158410 SERPINF2 ENSDARG00000061383 1 Not determined 2
zgc:56530 CSTA ENSDARG00000045352 2 Not determined 1
zgc:66109 SAG ENSDARG00000012610 3 Not determined 2
zgc:73369 CCDC58 ENSDARG00000045351 None Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • C2orf16
  • C3orf28
  • C9orf52
  • DGKD
  • MGC14376
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