GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Ischemic stroke is associated with the ABO locus: the EuroCLOT study.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
cfh CFHR4 ENSDARG00000075761 3 Not determined 3
cfhl1 CFHR4 ENSDARG00000056771 2 Not determined 3
cfhl2 CFHR4 ENSDARG00000056778 4 Not determined 3
cfhl3 CFHR4 ENSDARG00000094661 None Not determined 3
cfhl4 CFHR4 ENSDARG00000094496 None Not determined 3
enox1 ENOX1 ENSDARG00000060243 1 Not determined 3
f13a1 F13A1 ENSDARG00000036893 1 Not determined 2
f3a F3 ENSDARG00000021013 None Not determined 3
f3b F3 ENSDARG00000005673 None Not determined 3
LOC558353 F13A1 ENSDARG00000094832 None Not determined 2
Q5RI69_DANRE CFHR4 ENSDARG00000094134 None Not determined 3
si:dkey-114d20.1 CFHR4 ENSDARG00000092786 None Not determined 3
si:dkey-114d20.3 CFHR4 ENSDARG00000091868 None Not determined 3
zgc:152982 F13A1 ENSDARG00000045453 4 Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • ABO
  • ABO
  • ABO
  • ABO
  • F7/F10
  • F7/F10
  • F7/F10
  • F7/F10
  • F7/F10
  • FLJ33360
  • ORM1
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