(GWAS data used on the Zebrafish Mutation Project Web site comes from

Identification of inherited genetic variations influencing prognosis in early-onset breast cancer.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
LOC562928 SYT6 ENSDARG00000031463 2 Not determined 2
ntn1a NTN1 ENSDARG00000033733 2 Not determined 1
ntn1b NTN1 ENSDARG00000022531 1 Not determined 1
pbx1a PBX1 ENSDARG00000089610 6 Not determined 2
si:ch211-130m23.2 ARRDC3 ENSDARG00000095136 None Not determined 2
si:dkey-172m14.2 ARRDC3 ENSDARG00000067664 None Not determined 2
si:dkey-172m14.3 ARRDC3 ENSDARG00000052690 1 Not determined 2
syt6a SYT6 ENSDARG00000076730 1 Not determined 2
zgc:110353 ARRDC3 ENSDARG00000039443 1 Not determined 2
zgc:110626 ARRDC3 ENSDARG00000053159 4 Not determined 2
zgc:158824 PBX1 ENSDARG00000089550 2 Not determined 2
zgc:92034 ARRDC3 ENSDARG00000036028 None Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • RORa