GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association analysis of blood biomarkers in chronic obstructive pulmonary disease.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ahnak AHNAK ENSDARG00000061764 11 Not determined 1
anxa11b ANXA11 ENSDARG00000002632 1 Not determined 2
apip APIP ENSDARG00000003132 None Not determined 2
ehf EHF ENSDARG00000052115 None Not determined 5
eya1 EYA1 ENSDARG00000014259 3 Not determined 2
fgb FGB ENSDARG00000008969 2 Not determined 4
fut8 FUT8 ENSDARG00000015449 2 Not determined 5
hbl1 SFTPD ENSDARG00000068221 None Not determined 1
hbl2 SFTPD ENSDARG00000094681 1 Not determined 1
hbl3 SFTPD ENSDARG00000068220 1 Not determined 1
hbl4 SFTPD ENSDARG00000054202 None Not determined 1
hnf1a HNF1A ENSDARG00000009470 None Not determined 21
JAKMIP3 JAKMIP3 ENSDARG00000021213 5 Not determined 1
LOC100331714 FUT8 ENSDARG00000088117 3 Not determined 5
LOC568110 WNT7A ENSDARG00000002483 None Not determined 1
ntm NTM ENSDARG00000018065 1 Not determined 3
ntm OPCML ENSDARG00000018065 1 Not determined 2
p2rx7 P2RX7 ENSDARG00000042440 2 Not determined 1
Q08CT5_DANRE AHNAK ENSDARG00000056836 1 Not determined 1
rnf150 RNF150 ENSDARG00000024827 1 Not determined 1
si:ch211-245p7.3 HYDIN ENSDARG00000056764 26 Not determined 1
si:dkey-103j14.5 ASRGL1 ENSDARG00000002219 2 Not determined 1
si:dkey-159f12.3 RP1-21O18.1 ENSDARG00000076923 2 Not determined 1
si:dkeyp-20g2.1 CCHCR1 ENSDARG00000092464 None Not determined 5
si:dkeyp-20g2.3 CCHCR1 ENSDARG00000093389 None Not determined 5
wnt7aa WNT7A ENSDARG00000044827 None Not determined 1
wu:fc09a11 ANXA11 ENSDARG00000077383 2 Not determined 2
zgc:103568 ASRGL1 ENSDARG00000021681 None Not determined 1
zgc:158299 RP1-21O18.1 ENSDARG00000006601 None Not determined 1
zgc:92168 RNF150 ENSDARG00000009524 None Not determined 1
zgc:92901 OPCML ENSDARG00000013005 2 Not determined 2
zgc:92901 NTM ENSDARG00000013005 2 Not determined 3

The following reported genes could not be linked automatically to a zebrafish gene:

  • AC090398.2
  • AC138517.1
  • ATP2C2
  • C21orf34
  • FGFR3P
  • HLA-C
  • KB-1137H10.1
  • PELI2
  • PSORS1C1
  • PSORS1C1
  • RP1-23E21.2
  • RP11-369J21.2
  • RP11-369J21.4
  • RP11-369J21.5
  • RP11-369J21.6
  • RP11-479O17.4
  • SCGB1A1
  • TCF1
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