GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association analysis identifies new lung cancer susceptibility loci in never-smoking women in Asia.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
BPTF BPTF ENSDARG00000077361 8 Not determined 2
dcbld1 DCBLD1 ENSDARG00000015907 4 Not determined 4
LOC100005691 DCBLD1 ENSDARG00000087892 None Not determined 4
rif1 RIF1 ENSDARG00000062650 3 Not determined 1
ros1 ROS1 ENSDARG00000039893 None Not determined 2
tert TERT ENSDARG00000042637 3 Normal 18
tnfaip6 TNFAIP6 ENSDARG00000093440 None Not determined 1
tp63 TP63 ENSDARG00000044356 4 Normal 9
vti1a VTI1A ENSDARG00000045065 None Not determined 3

The following reported genes could not be linked automatically to a zebrafish gene:

  • HLA class II
  • hTERT
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