GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Novel loci associated with PR interval in a genome-wide association study of 10 African American cohorts.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
cav1 CAV1 ENSDARG00000052004 None Not determined 5
meis1 MEIS1 ENSDARG00000012078 3 1 phenotype 4
meis3 MEIS1 ENSDARG00000002795 None Not determined 4
meis4.1a MEIS1 ENSDARG00000002937 4 Not determined 4
NP_001038387.1 SCN10A ENSDARG00000059692 6 Not determined 8
NP_001038387.1 SCN5A ENSDARG00000059692 6 Not determined 9
si:ch211-247j9.1 ARHGAP24 ENSDARG00000079283 1 Not determined 4
si:ch211-65i12.2 ARHGAP24 ENSDARG00000060175 5 Not determined 4
tbx5a TBX5 ENSDARG00000024894 None Not determined 10
tbx5b TBX5 ENSDARG00000092060 None Not determined 10

The following reported genes could not be linked automatically to a zebrafish gene:

  • ITGA9
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