GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A meta-analysis of genome-wide association studies to identify prostate cancer susceptibility loci associated with aggressive and non-aggressive disease.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ceacam1 CEACAM21 ENSDARG00000041119 2 Not determined 2
cxcr3.1 CEACAM21 ENSDARG00000078177 None Not determined 2
si:ch211-264f5.6 CEACAM21 ENSDARG00000079372 2 Not determined 2
si:dkey-11o1.2 CEACAM21 ENSDARG00000095772 None Not determined 2
si:dkey-11o1.3 CEACAM21 ENSDARG00000093279 1 Not determined 2
si:dkey-217f16.6 TNRC6B ENSDARG00000076389 1 Not determined 5
si:dkey-250k15.10 CEACAM21 ENSDARG00000092520 None Not determined 2
si:dkey-250k15.7 CEACAM21 ENSDARG00000095048 None Not determined 2
si:dkey-250k15.9 CEACAM21 ENSDARG00000095134 None Not determined 2
si:dkey-46g23.1 TNRC6B ENSDARG00000079723 1 Not determined 5
TNRC6B (1 of 3) TNRC6B ENSDARG00000074161 8 Not determined 5
zgc:198329 CEACAM21 ENSDARG00000076981 1 Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • ATP5SL
  • ATP5SL
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