GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study identifies TNFSF15 and POU2AF1 as susceptibility loci for primary biliary cirrhosis in the Japanese population.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
il7r IL7R ENSDARG00000078970 None Not determined 7
stat4 STAT4 ENSDARG00000028731 3 Not determined 19
zgc:101654 ORMDL3 ENSDARG00000025555 1 Not determined 14

The following reported genes could not be linked automatically to a zebrafish gene:

  • CD80
  • GSDMB
  • IKZF3
  • NFKB1
  • POU2AF1
  • TNFSF15
  • ZPBP2
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