GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study of Alzheimer's disease.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
apoeb APOE ENSDARG00000040295 1 Not determined 42
bin1 BIN1 ENSDARG00000058820 3 Not determined 6
picalm PICALM ENSDARG00000012866 1 Not determined 5
picalml PICALM ENSDARG00000014137 2 Not determined 5
ppp1r3b PPP1R3B ENSDARG00000044691 None Not determined 9
si:dkey-242g16.2 PPP1R3B ENSDARG00000069377 None Not determined 9
si:rp71-68g1.4 BIN1 ENSDARG00000042114 3 Not determined 6
tomm40 TOMM40 ENSDARG00000092112 1 Not determined 23
tomm40l TOMM40 ENSDARG00000036721 None Not determined 23
zgc:110064 APOE ENSDARG00000086370 1 Not determined 42
zgc:77112 PPP1R3B ENSDARG00000015657 None Not determined 9

The following reported genes could not be linked automatically to a zebrafish gene:

  • APOC1
  • FLJ37543
  • MMP12
  • MMP3
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