GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genetically distinct subsets within ANCA-associated vasculitis.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
col11a2 COL11A2 ENSDARG00000012422 6 Not determined 1
edil3 F8 ENSDARG00000093413 None Not determined 2
edil3b F8 ENSDARG00000060877 2 Normal 2
fmr1 FMR1 ENSDARG00000037433 6 2 normal 1
fzd8a FZD8 ENSDARG00000045444 7 Not determined 3
fzd8b FZD8 ENSDARG00000038569 2 Not determined 3
LOC100004252 ARHGAP18 ENSDARG00000074740 1 Not determined 1
mfge8a F8 ENSDARG00000015349 None Not determined 2
mfge8b F8 ENSDARG00000045803 2 Not determined 2
mxra5 MXRA5 ENSDARG00000074815 10 Not determined 1
pcdh11x PCDH11X ENSDARG00000033556 2 Not determined 2
pcdh11x PCDH11Y ENSDARG00000033556 2 Not determined 1
si:ch211-141h12.1 MXRA5 ENSDARG00000076309 9 Normal 1
tsc22d1 TSC22D1 ENSDARG00000038306 2 Not determined 1
wnt9b WNT9B ENSDARG00000037889 3 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • CPXCR1
  • FMR1NB
  • HLA-DP
  • KATNAL1
  • MAGEC2
  • MRLC2
  • PABPC5
  • SERPINA1
  • SERPINA11
  • TGIF2LX
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