GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association study of caffeine-related sleep disturbance: confirmation of a role for a common variant in the adenosine receptor.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
LOC100329781 PRIMA1 ENSDARG00000077377 None Not determined 1
MR1BB_DANRE MTNR1B ENSDARG00000086493 None Not determined 15
mtnr1ba MTNR1B ENSDARG00000053833 None Not determined 15
mtnr1bb MTNR1B ENSDARG00000086883 None Not determined 15
MTUS2 (2 of 2) MTUS2 ENSDARG00000074984 None Not determined 2
nedd4l NEDD4L ENSDARG00000060006 3 Not determined 3
si:ch211-248g20.1 P2RY2 ENSDARG00000063545 1 Not determined 1
si:ch211-248g20.2 P2RY2 ENSDARG00000075370 None Not determined 1
si:ch211-248g20.3 P2RY2 ENSDARG00000063549 2 Not determined 1
si:ch211-69k21.4 MTUS2 ENSDARG00000062347 4 Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • AC105008.1
  • RP11-430J3.1
  • RP11-479A21.1
  • RP11-889D3.1
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