GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association study of host genetic determinants of the antibody response to Anthrax Vaccine Adsorbed.

The human homologues of the following genes have been identified in this study:

Gene name	Reported Gene	Ensembl ID	Alleles found	Associated phenotype	Study Count
A7MC08_DANRE	OLFM4	ENSDARG00000041960	1	Not determined	3
ASTN2 (3 of 3)	ASTN2	ENSDARG00000090831	None	Not determined	9
ASTN2 (2 of 3)	ASTN2	ENSDARG00000086640	None	Not determined	9
ASTN2 (1 of 3)	ASTN2	ENSDARG00000089410	1	Not determined	9
h2afy	H2AFY	ENSDARG00000053442	2	Not determined	3
LOC100002026	PCDH8	ENSDARG00000042586	1	Not determined	2
LOC100151181	SMAD4	ENSDARG00000070428	1	Not determined	1
LOC100330946	MEX3C	ENSDARG00000068971	None	Not determined	2
LOC568576	OLFM4	ENSDARG00000086947	1	Not determined	3
LOC568857	OLFM4	ENSDARG00000086688	1	Not determined	3
LOC569427	OLFM4	ENSDARG00000087625	2	Not determined	3
LOC797571	OLFM4	ENSDARG00000074322	2	Not determined	3
mhc2dab	HLA-DRB1	ENSDARG00000079105	None	Not determined	35
NP_001091732.1	HLA-DRB1	ENSDARG00000071168	1	Not determined	35
NP_001116172.1	SMAD4	ENSDARG00000075226	1	Not determined	1
pcdh8	PCDH8	ENSDARG00000006467	1	Not determined	2
pitx1	PITX1	ENSDARG00000042785	None	Not determined	4
ppa2	PPA2	ENSDARG00000009685	2	Not determined	2
si:busm1-104n07.3	HLA-DRB1	ENSDARG00000074510	1	Normal	35
si:busm1-160c18.1	HLA-DQA1	ENSDARG00000053739	2	Not determined	27
si:busm1-160c18.3	HLA-DRB1	ENSDARG00000053738	None	Not determined	35
si:busm1-160c18.3	HLA-DRB1	ENSDARG00000093706	None	Not determined	35
si:busm1-194e12.11	HLA-DQA1	ENSDARG00000055441	1	Not determined	27
si:busm1-194e12.12	HLA-DRB1	ENSDARG00000055447	None	Not determined	35
si:busm1-228j01.3	HLA-DQA1	ENSDARG00000086294	2	Not determined	27
si:busm1-228j01.4	HLA-DRB1	ENSDARG00000088872	2	Not determined	35
si:busm1-228j01.5	HLA-DQA1	ENSDARG00000079593	3	Not determined	27
si:busm1-228j01.6	HLA-DRB1	ENSDARG00000041705	1	Not determined	35
si:ch1073-403i13.1	HLA-DQA1	ENSDARG00000001832	None	Not determined	27
si:ch73-211l2.3	HLA-DQA1	ENSDARG00000075932	1	Not determined	27
si:dkey-222b8.1	SMAD4	ENSDARG00000045094	1	Not determined	1
si:dkeyp-2h4.2	HLA-DQA1	ENSDARG00000031745	None	Not determined	27
si:zfos-2070c2.1	HLA-DQA1	ENSDARG00000070206	None	Not determined	27
si:zfos-2070c2.3	HLA-DRB1	ENSDARG00000076307	None	Not determined	35
si:zfos-367g9.1	HLA-DQA1	ENSDARG00000074816	1	Not determined	27
smad4	SMAD4	ENSDARG00000023527	None	Not determined	1
spsb1	SPSB1	ENSDARG00000056515	None	Not determined	3
spsb4b	SPSB1	ENSDARG00000040538	2	Not determined	3
taf1	TAF1L	ENSDARG00000035330	12	Normal	1
wu:fd58b11	HLA-DRB1	ENSDARG00000054921	None	Not determined	35
zgc:123107	HLA-DQA1	ENSDARG00000020286	None	Not determined	27
zgc:123181	PCDH8	ENSDARG00000095430	1	Not determined	2
zgc:153067	HLA-DRB1	ENSDARG00000056330	2	Not determined	35

• View study
• View gene list for all "Immune response to anthrax vaccine " studies

The following reported genes could not be linked automatically to a zebrafish gene:

• TET2
• TMEM215