GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A mega-analysis of genome-wide association studies for major depressive disorder.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
alg3 ALG3 ENSDARG00000053155 2 Not determined 1
ap2m1a AP2M1 ENSDARG00000002790 2 Not determined 1
ap2m1b AP2M1 ENSDARG00000033899 1 Not determined 1
B1H1M8_DANRE PARP15 ENSDARG00000075426 None Not determined 1
camk2n1a CAMK2N2 ENSDARG00000025855 None Not determined 1
dvl3 DVL3 ENSDARG00000015707 4 Not determined 1
ece1 ECE2 ENSDARG00000087841 3 Not determined 2
eif2b5 EIF2B5 ENSDARG00000074995 1 Not determined 1
EIF2B5 (2 of 2) EIF2B5 ENSDARG00000086151 None Not determined 1
FBXO31 FBXO31 ENSDARG00000062195 4 Not determined 1
LOC100149082 DVL3 ENSDARG00000002148 1 Not determined 1
LOC100331227 ABCF3 ENSDARG00000089705 1 Not determined 1
LOC100333588 HTR3D ENSDARG00000074824 None Not determined 1
LOC100333588 HTR3C ENSDARG00000074824 None Not determined 1
LOC100333588 HTR3E ENSDARG00000074824 None Not determined 1
LOC100333796 HTR3E ENSDARG00000078428 1 Not determined 1
LOC100333796 HTR3D ENSDARG00000078428 1 Not determined 1
LOC100333796 HTR3C ENSDARG00000078428 1 Not determined 1
map1lc3b MAP1LC3B ENSDARG00000020048 None Not determined 1
parp12b PARP15 ENSDARG00000057974 None Not determined 1
parp12b PARP9 ENSDARG00000057974 None Not determined 1
PARP14 PARP15 ENSDARG00000074139 5 Not determined 1
si:busm1-163l24.3 DTX3L ENSDARG00000056469 2 Not determined 1
si:ch211-219a4.3 PARP15 ENSDARG00000040445 None Not determined 1
si:ch211-219a4.6 PARP9 ENSDARG00000006848 1 Not determined 1
si:ch211-255l14.7 ZCCHC14 ENSDARG00000012738 2 Not determined 1
trps1 TRPS1 ENSDARG00000068028 3 Not determined 4
vwa5b2 VWA5B2 ENSDARG00000075886 5 Normal 1
zgc:92198 CAMK2N2 ENSDARG00000090424 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • MIR1224
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