GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association study in the Japanese population confirms 9p21 and 14q23 as susceptibility loci for primary open angle glaucoma.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
cdkn2b CDKN2B ENSDARG00000037262 2 Not determined 30
six1a SIX1 ENSDARG00000039304 1 Not determined 4
six1b SIX1 ENSDARG00000026473 1 Not determined 4
six6a SIX6 ENSDARG00000025187 3 Not determined 4
six6b SIX6 ENSDARG00000031316 None Not determined 4
six7 SIX6 ENSDARG00000070107 None Not determined 4
six9 SIX6 ENSDARG00000068407 1 Not determined 4
six9 SIX1 ENSDARG00000068407 1 Not determined 4

The following reported genes could not be linked automatically to a zebrafish gene:

  • NCKAP5
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