GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome wide study of maternal and parent-of-origin effects on the etiology of orofacial clefts.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ATXN3L ATXN3 ENSDARG00000009264 None Not determined 3
bmp6 BMP6 ENSDARG00000015686 None Not determined 4
fhit FHIT ENSDARG00000068850 None Not determined 9
fhit FHIT ENSDARG00000078195 None Not determined 9
LOC556973 TXNDC16 ENSDARG00000032256 4 Not determined 1
LRRC7 LRRC7 ENSDARG00000079670 7 Not determined 4
macc1 SH3BP4 ENSDARG00000040717 None Not determined 2
rasgrf2 RASGRF2 ENSDARG00000002816 5 Not determined 1
RASGRF2 (1 of 2) RASGRF2 ENSDARG00000075054 3 Not determined 1
sh3bp4a SH3BP4 ENSDARG00000020000 1 Not determined 2
si:dkey-33c18.3 SPATA13 ENSDARG00000062837 2 Not determined 3
si:dkey-57b6.3 SH3BP4 ENSDARG00000030104 2 Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • GRM7
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