GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association scan on the levels of markers of inflammation in Sardinians reveals associations that underpin its complex regulation.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ba1l HBB ENSDARG00000089087 None Not determined 7
hbbe1.1 HBB ENSDARG00000089963 None Not determined 7
hbbe2 HBB ENSDARG00000045143 None Not determined 7
hbbe3 HBB ENSDARG00000038147 None Not determined 7
NP_001038711.1 CADM3 ENSDARG00000057013 3 Not determined 1
si:busm1-118j2.5 HBB ENSDARG00000087390 None Not determined 7
si:busm1-118j2.5 HBB ENSDARG00000090689 1 Not determined 7
si:ch211-234p6.10 CRP ENSDARG00000056498 None Not determined 13
si:ch211-234p6.12 CRP ENSDARG00000042613 None Not determined 13
si:ch211-234p6.13 CRP ENSDARG00000056462 None Not determined 13
si:ch211-234p6.14 CRP ENSDARG00000071454 2 Not determined 13
si:ch211-234p6.7 CRP ENSDARG00000071456 None Not determined 13
si:ch211-234p6.8 CRP ENSDARG00000071457 None Not determined 13
si:ch211-234p6.9 CRP ENSDARG00000095730 None Not determined 13
si:ch211-270n8.1 CRP ENSDARG00000045089 None Not determined 13
si:dkey-78k11.2 CR1 ENSDARG00000095512 None Not determined 5
zgc:101049 CRP ENSDARG00000071051 1 Not determined 13
zgc:110775 CR1 ENSDARG00000056075 1 Not determined 5
zgc:92880 HBB ENSDARG00000069734 None Not determined 7

The following reported genes could not be linked automatically to a zebrafish gene:

  • ABO
  • DARC
  • DARC
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