GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study of classical Hodgkin lymphoma and Epstein-Barr virus status-defined subgroups.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
mhc1uba MICB ENSDARG00000075963 None Not determined 7
mhc1ze MICB ENSDARG00000074765 None Not determined 7
mhc1zel MICB ENSDARG00000092162 1 Not determined 7
NP_919406.1 MICB ENSDARG00000086877 1 Not determined 7
Q8MHB3_DANRE MICB ENSDARG00000076734 None Not determined 7
Q8MHB6_DANRE MICB ENSDARG00000088022 1 Not determined 7
si:busm1-160c18.1 HLA-DRA ENSDARG00000053739 2 Not determined 21
si:busm1-194e12.11 HLA-DRA ENSDARG00000055441 1 Not determined 21
si:busm1-228j01.3 HLA-DRA ENSDARG00000086294 2 Not determined 21
si:busm1-228j01.5 HLA-DRA ENSDARG00000079593 3 Not determined 21
si:ch1073-403i13.1 HLA-DRA ENSDARG00000001832 None Not determined 21
si:ch211-287j19.6 MICB ENSDARG00000001470 2 Not determined 7
si:ch73-211l2.3 HLA-DRA ENSDARG00000075932 1 Not determined 21
si:ch73-213j4.4 MICB ENSDARG00000092731 None Not determined 7
si:dkey-24n17.6 ERAP1 ENSDARG00000013024 2 Not determined 7
si:dkeyp-2h4.2 HLA-DRA ENSDARG00000031745 None Not determined 21
si:zfos-2070c2.1 HLA-DRA ENSDARG00000070206 None Not determined 21
si:zfos-367g9.1 HLA-DRA ENSDARG00000074816 1 Not determined 21
zgc:123107 HLA-DRA ENSDARG00000020286 None Not determined 21
zgc:136614 MICB ENSDARG00000069471 None Not determined 7
zgc:56194 ERAP1 ENSDARG00000021859 1 Not determined 7
zgc:64115 MICB ENSDARG00000036588 4 Not determined 7

The following reported genes could not be linked automatically to a zebrafish gene:

  • IL13
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