GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association study of COPD identifies a susceptibility locus on chromosome 19q13.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
chrna5 CHRNA5 ENSDARG00000003420 3 Normal 13
hhip HHIP ENSDARG00000060397 3 Not determined 13
im:7139293 FAM13A ENSDARG00000075564 1 Not determined 4
ireb2 IREB2 ENSDARG00000021466 6 Not determined 3
LOC568467 CHRNA3 ENSDARG00000054497 2 Not determined 15
si:ch211-113p18.4 EGLN2 ENSDARG00000062562 None Not determined 2
zgc:101015 RAB4B ENSDARG00000012177 3 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • CYP2A6
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