GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Identification of germline susceptibility loci in ETV6-RUNX1-rearranged childhood acute lymphoblastic leukemia.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
C7U137_DANRE PTPRJ ENSDARG00000091539 1 Not determined 2
ints10 INTS10 ENSDARG00000043031 1 Not determined 1
LOC570448 SLCO3A1 ENSDARG00000068296 None Not determined 4
PTPRJ (3 of 3) PTPRJ ENSDARG00000086511 3 Not determined 2
ptprja PTPRJ ENSDARG00000033042 6 Not determined 2
slco3a1 SLCO3A1 ENSDARG00000018726 2 Not determined 4
SLCO3A1 (3 of 3) SLCO3A1 ENSDARG00000074173 None Not determined 4
tp63 TP63 ENSDARG00000044356 4 Normal 9

The following reported genes could not be linked automatically to a zebrafish gene:

  • C14orf118
  • C14orf118
  • OR8U8
  • OR8U8
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