GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide meta-analysis of genetic variants associated with allergic rhinitis and grass sensitization and their interaction with birth order.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
abl2 ABL2 ENSDARG00000013841 7 Not determined 1
akap9 CROCC ENSDARG00000079610 4 Not determined 1
CROCC CROCC ENSDARG00000089609 None Not determined 1
dhrs7 DHRS7 ENSDARG00000003444 None Not determined 1
DNAH5 DNAH5 ENSDARG00000087373 10 Not determined 5
entpd6 ENTPD6 ENSDARG00000008757 1 Not determined 1
gli3 GLI3 ENSDARG00000052131 7 Normal 2
LOC100332507 CROCC ENSDARG00000086540 1 Not determined 1
ppm1aa PPM1A ENSDARG00000032155 3 Not determined 1
ppm1ab PPM1A ENSDARG00000043250 None Not determined 1
sema6a SEMA6A ENSDARG00000043028 6 Not determined 2
si:ch211-149n12.2 TMEM108 ENSDARG00000090230 None Not determined 2
si:ch211-220f16.2 CROCC ENSDARG00000007976 2 Not determined 1
si:ch73-211p17.2 LRRC32 ENSDARG00000040621 None Not determined 2
si:ch73-22b20.2 EPS15 ENSDARG00000078216 1 Not determined 1
si:dkey-230p4.1 CROCC ENSDARG00000020834 15 Not determined 1
tmem232 TMEM232 ENSDARG00000067646 None Not determined 1
zgc:56039 C11orf30 ENSDARG00000059059 1 Not determined 5
zgc:56230 CLEC16A ENSDARG00000038094 3 Not determined 13

The following reported genes could not be linked automatically to a zebrafish gene:

  • HLA region
  • IL2
  • SLCA25A46
  • SLCA25A46
  • TSLP
Short-link