GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study of body height in African Americans: the Women's Health Initiative SNP Health Association Resource (SHARe).

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
arsh ARSE ENSDARG00000002299 1 Not determined 2
hmga2 HMGA2 ENSDARG00000069912 None Not determined 18
hsp47 SERPINH1 ENSDARG00000019949 None Not determined 2
LOC100004911 TMEM100 ENSDARG00000090990 None Not determined 1
LOC100334742 TMEM100 ENSDARG00000087687 None Not determined 1
LOC100334833 HMGA2 ENSDARG00000091038 None Not determined 18
map3k3 MAP3K3 ENSDARG00000060348 1 Not determined 3
prkca PRKCA ENSDARG00000039241 None Not determined 2
si:ch211-167h3.1 DYM ENSDARG00000042555 6 Not determined 4
zgc:113025 SERPINH1 ENSDARG00000036445 4 Normal 2
zgc:171516 MAP3K3 ENSDARG00000074219 2 Not determined 3
zgc:171630 SERPINH1 ENSDARG00000075954 1 Not determined 2
zgc:195139 PCTP ENSDARG00000073985 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • LCORL
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