GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study identifies three new susceptibility loci for esophageal squamous-cell carcinoma in Chinese populations.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
A5WZG4_DANRE UNC5CL ENSDARG00000062725 1 Not determined 1
anp32a ANP32A ENSDARG00000006487 None Not determined 1
C12orf51 (3 of 3) C12orf51 ENSDARG00000090715 None Not determined 9
C12orf51 (1 of 3) C12orf51 ENSDARG00000079151 5 Not determined 9
csnk1a1 CSNK1A1 ENSDARG00000007993 None Not determined 1
csnk1a1 CSNK1A1 ENSDARG00000052674 None Not determined 1
LOC100000009 SEMA5B ENSDARG00000075648 5 Not determined 1
LOC100330423 C12orf51 ENSDARG00000003682 4 Not determined 9
LOC100333977 RUNX1 ENSDARG00000087646 None Not determined 3
pde4d PDE4D ENSDARG00000032761 6 Not determined 7
plce1 PLCE1 ENSDARG00000089601 5 Not determined 7
PLCE1 (1 of 2) PLCE1 ENSDARG00000087921 4 Not determined 7
rpl6 RPL6 ENSDARG00000058451 None Not determined 2
runx1 RUNX1 ENSDARG00000025921 None Not determined 3
sema5b SEMA5B ENSDARG00000061471 5 Not determined 1
tbl1xr1 TBL1XR1 ENSDARG00000008966 4 Not determined 2
unc5da UNC5CL ENSDARG00000092722 None Not determined 1
unc5db UNC5CL ENSDARG00000061541 4 Not determined 1
zgc:110312 TBL1XR1 ENSDARG00000058696 None Not determined 2
zgc:85777 ACAD10 ENSDARG00000027009 2 Normal 3
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