GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide joint SNP and CNV analysis of aortic root diameter in African Americans: the HyperGEN study.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
crcp CRCP ENSDARG00000069373 1 Not determined 1
fhit FHIT ENSDARG00000068850 None Not determined 9
fhit FHIT ENSDARG00000078195 None Not determined 9
got2a GOT2 ENSDARG00000041068 None Not determined 2
got2b GOT2 ENSDARG00000005840 None Not determined 2
NP_001001831.1 PDYN ENSDARG00000079395 None Not determined 2
pdyn PDYN ENSDARG00000087798 None Not determined 2
rabgef1 KCTD7 ENSDARG00000014430 3 Not determined 1
rabgef1 RABGEF1 ENSDARG00000014430 3 Not determined 1
rabgef1l KCTD7 ENSDARG00000015968 None Not determined 1
rabgef1l RABGEF1 ENSDARG00000015968 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • LOC401365
  • LOC493754
  • SIRPA
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