GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association analysis identifies three psoriasis susceptibility loci.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
kdm2aa FBXL19 ENSDARG00000059653 3 Not determined 1
LOC100149436 SPATA2 ENSDARG00000088428 None Not determined 2
nfkbiaa NFKBIA ENSDARG00000005481 None Not determined 2
nfkbiab NFKBIA ENSDARG00000007693 1 Not determined 2
nos2b NOS2 ENSDARG00000031976 5 Normal 2
psma6a PSMA6 ENSDARG00000019398 None Not determined 1
psma6b PSMA6 ENSDARG00000013966 2 Not determined 1
psma6l PSMA6 ENSDARG00000043899 None Not determined 1
rnf114 RNF114 ENSDARG00000009886 1 Not determined 1
rps26 RPS26 ENSDARG00000037071 None Not determined 2
rps26l RPS26 ENSDARG00000030408 None Not determined 2
sdc4 SDC4 ENSDARG00000059906 1 Not determined 1
si:dkey-57m14.4 NOS2 ENSDARG00000026925 3 Not determined 2
slc9a8 SLC9A8 ENSDARG00000020699 2 Not determined 1
snai1a SNAI1 ENSDARG00000056995 None Not determined 1
snai1b SNAI1 ENSDARG00000046019 3 Not determined 1
spata2 SPATA2 ENSDARG00000063250 2 Not determined 2
zgc:158376 FBXL19 ENSDARG00000076929 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • POL3S
Short-link