GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A large-scale, consortium-based genomewide association study of asthma.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
il2rb IL2RB ENSDARG00000075720 3 Not determined 3
LOC100000685 SLC22A5 ENSDARG00000068603 1 Not determined 5
roraa RORA ENSDARG00000031768 2 Not determined 11
rorab RORA ENSDARG00000001910 2 Not determined 11
si:ch1073-409b12.4 SLC22A5 ENSDARG00000094112 None Not determined 5
slc22a4 SLC22A5 ENSDARG00000005335 2 Not determined 5
smad3a SMAD3 ENSDARG00000036096 2 Not determined 5
smad3b SMAD3 ENSDARG00000010207 2 Not determined 5

The following reported genes could not be linked automatically to a zebrafish gene:

  • GSDMA
  • GSDMB
  • HLA-DQ
  • IL13
  • IL18R1
  • IL33
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