GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

New loci associated with central cornea thickness include COL5A1, AKAP13 and AVGR8.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
akap13 AKAP13 ENSDARG00000023868 None Not determined 2
AKAP13 (2 of 2) AKAP13 ENSDARG00000079358 1 Not determined 2
banp BANP ENSDARG00000017562 3 Not determined 2
foxo1a FOXO1 ENSDARG00000063540 1 Not determined 3
foxo1b FOXO1 ENSDARG00000061549 1 Not determined 3
si:dkey-87m23.1 COL5A1 ENSDARG00000012593 7 Not determined 5
si:dkey-91i10.2 AKAP13 ENSDARG00000074034 1 Not determined 2
zgc:158458 PDE8A ENSDARG00000088905 1 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • AL354828.1
  • AVGR8
  • ZNF469
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