GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study identifies BICD1 as a susceptibility gene for emphysema.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
cdh10 CDH6 ENSDARG00000055843 3 Normal 2
cdh6 CDH6 ENSDARG00000014522 1 Not determined 2
CSMD1 CSMD1 ENSDARG00000058353 3 Not determined 12
LOC100330316 BICD1 ENSDARG00000074357 2 Not determined 4
pard3 PARD3 ENSDARG00000010583 10 Not determined 4
PARD3 (2 of 2) PARD3 ENSDARG00000091238 2 Not determined 4
si:ch211-136i24.1 BICD1 ENSDARG00000079496 5 Normal 4
si:dkey-255g15.1 ADARB2 ENSDARG00000071823 1 Not determined 3
zgc:162200 BICD1 ENSDARG00000079934 1 Not determined 4

The following reported genes could not be linked automatically to a zebrafish gene:

  • AC006320.2
  • AL139 119.2
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