GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association studies of serum magnesium, potassium, and sodium concentrations identify six Loci influencing serum magnesium levels.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
atp2b1a ATP2B1 ENSDARG00000012684 2 Not determined 6
atp2b1b ATP2B1 ENSDARG00000007788 7 Not determined 6
hoxd9a HOXD9 ENSDARG00000059274 1 Not determined 1
LOC100149353 TRPM6 ENSDARG00000087272 5 Not determined 1
prmt7 PRMT7 ENSDARG00000051902 3 Not determined 1
SHROOM3 (2 of 2) SHROOM3 ENSDARG00000078705 2 Not determined 6
SHROOM3 (1 of 2) SHROOM3 ENSDARG00000090422 None Not determined 6
si:ch211-217k17.9 MUC1 ENSDARG00000093494 None Not determined 2
si:ch211-243k12.1 LUZP2 ENSDARG00000068247 1 Not determined 5

The following reported genes could not be linked automatically to a zebrafish gene:

  • DCDC5
  • MDS1
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