GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association analysis identifies multiple loci related to resting heart rate.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
cx28.1 GJA1 ENSDARG00000041792 1 Not determined 3
cx28.9 GJA1 ENSDARG00000041797 None Not determined 3
cx32.2 GJA1 ENSDARG00000076789 3 Not determined 3
cx32.3 GJA1 ENSDARG00000041787 None Not determined 3
cx34.5 GJA1 ENSDARG00000069411 1 Not determined 3
cx43 GJA1 ENSDARG00000041799 3 Not determined 3
LOC100001366 MYH7 ENSDARG00000093715 3 Not determined 1
LOC100001366 MYH6 ENSDARG00000093715 3 Not determined 3
LOC100329748 MYH6 ENSDARG00000093148 None Not determined 3
LOC100329748 MYH7 ENSDARG00000093148 None Not determined 1
LOC100329813 MYH6 ENSDARG00000092902 3 Not determined 3
LOC100329813 MYH7 ENSDARG00000092902 3 Not determined 1
LOC565638 GJA1 ENSDARG00000071192 1 Not determined 3
myh6 MYH7 ENSDARG00000090637 6 Not determined 1
myh6 MYH6 ENSDARG00000090637 6 Not determined 3
myha MYH7 ENSDARG00000071435 4 Not determined 1
myha MYH6 ENSDARG00000071435 4 Not determined 3
myhb MYH6 ENSDARG00000001993 4 Not determined 3
myhb MYH7 ENSDARG00000001993 4 Not determined 1
myhc4 MYH7 ENSDARG00000035438 6 Not determined 1
myhc4 MYH6 ENSDARG00000035438 6 Not determined 3
myhz1.1 MYH7 ENSDARG00000067990 2 Not determined 1
myhz1.1 MYH6 ENSDARG00000067990 2 Not determined 3
myhz1.2 MYH6 ENSDARG00000067995 8 Not determined 3
myhz1.2 MYH7 ENSDARG00000067995 8 Not determined 1
myhz1.3 MYH7 ENSDARG00000067997 4 Not determined 1
myhz1.3 MYH6 ENSDARG00000067997 4 Not determined 3
myhz2 MYH6 ENSDARG00000012944 8 Not determined 3
myhz2 MYH7 ENSDARG00000012944 8 Not determined 1
si:ch211-158m24.10 MYH7 ENSDARG00000090103 7 Not determined 1
si:ch211-158m24.10 MYH6 ENSDARG00000090103 7 Not determined 3
slc12a9 SLC12A9 ENSDARG00000060366 3 Not determined 3
slc35f1 SLC35F1 ENSDARG00000053003 None Not determined 6
smyhc1 MYH7 ENSDARG00000071430 7 Not determined 1
smyhc1 MYH6 ENSDARG00000071430 7 Not determined 3
smyhc2 MYH6 ENSDARG00000071433 6 Not determined 3
smyhc2 MYH7 ENSDARG00000071433 6 Not determined 1
smyhc3 MYH6 ENSDARG00000045242 1 Not determined 3
smyhc3 MYH7 ENSDARG00000045242 1 Not determined 1
vmhc MYH6 ENSDARG00000079564 20 Not determined 3
vmhc MYH7 ENSDARG00000079564 20 Not determined 1
vmhcl MYH6 ENSDARG00000079782 7 Not determined 3
vmhcl MYH7 ENSDARG00000079782 7 Not determined 1
wu:fd14a01 MYH6 ENSDARG00000035437 3 Not determined 3
wu:fd14a01 MYH7 ENSDARG00000035437 3 Not determined 1
zgc:153039 SLC12A9 ENSDARG00000060524 None Not determined 3
zgc:163003 UFSP1 ENSDARG00000061610 1 Not determined 2
zgc:66156 MYH7 ENSDARG00000053207 1 Not determined 1
zgc:66156 MYH6 ENSDARG00000053207 1 Not determined 3
zgc:66156 MYH7 ENSDARG00000093467 None Not determined 1
zgc:66156 MYH6 ENSDARG00000093467 None Not determined 3

The following reported genes could not be linked automatically to a zebrafish gene:

  • CD34
  • FADS1
  • NDNG
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