GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
adam19b ADAM19 ENSDARG00000067545 3 Not determined 2
gpr126 GPR126 ENSDARG00000054137 1 Not determined 9
gstcd GSTCD ENSDARG00000036494 2 Not determined 3
hhip HHIP ENSDARG00000060397 3 Not determined 13
HTR4 HTR4 ENSDARG00000061940 1 Not determined 5
im:7139293 FAM13A ENSDARG00000075564 1 Not determined 4
INT12_DANRE INTS12 ENSDARG00000089644 None Not determined 2
ints12 INTS12 ENSDARG00000091678 None Not determined 2
LOC100150238 PPT2 ENSDARG00000068846 None Not determined 2
npnt NPNT ENSDARG00000018721 4 Not determined 2
ppt2 PPT2 ENSDARG00000070883 4 Normal 2
ptch1 PTCH1 ENSDARG00000016404 7 Normal 3
si:dkey-247m21.3 HTR4 ENSDARG00000001906 3 Not determined 5
zgc:55413 PPT2 ENSDARG00000014208 4 Not determined 2
zgc:55621 PPT2 ENSDARG00000010782 2 Not determined 2
zgc:66024 PPT2 ENSDARG00000068840 None Not determined 2
zgc:77118 PPT2 ENSDARG00000093176 1 Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • AGER
  • FLJ20184
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