GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association study of carotid atherosclerosis in HIV-infected men.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ap1b1 AP1B1 ENSDARG00000020621 3 Not determined 1
btr01 RFPL1 ENSDARG00000051965 4 Not determined 1
btr02 RFPL1 ENSDARG00000052215 1 Not determined 1
btr04 RFPL1 ENSDARG00000060962 1 Not determined 1
btr05 RFPL1 ENSDARG00000074813 2 Not determined 1
btr06 RFPL1 ENSDARG00000054184 None Not determined 1
btr07p RFPL1 ENSDARG00000094877 1 Not determined 1
btr09 RFPL1 ENSDARG00000054805 1 Not determined 1
btr12 RFPL1 ENSDARG00000051809 2 Not determined 1
btr16 RFPL1 ENSDARG00000028850 1 Not determined 1
btr20 RFPL1 ENSDARG00000075603 1 Not determined 1
btr21 RFPL1 ENSDARG00000094915 None Not determined 1
btr22 RFPL1 ENSDARG00000093049 None Not determined 1
btr24 RFPL1 ENSDARG00000093340 None Not determined 1
btr26 RFPL1 ENSDARG00000040860 2 Not determined 1
btr27 RFPL1 ENSDARG00000095500 4 Not determined 1
btr29 RFPL1 ENSDARG00000002046 1 Not determined 1
btr30 RFPL1 ENSDARG00000090028 1 Not determined 1
btr32 RFPL1 ENSDARG00000053940 None Not determined 1
LOC100331716 MAST4 ENSDARG00000078270 13 Not determined 2
LOC556805 RFPL1 ENSDARG00000090930 None Not determined 1
LOC569768 GRM8 ENSDARG00000076508 4 Not determined 3
LOC571944 RFPL1 ENSDARG00000090371 None Not determined 1
LOC792371 GRM8 ENSDARG00000077654 5 Not determined 3
LOC799840 RFPL1 ENSDARG00000008164 2 Not determined 1
nf2a NF2 ENSDARG00000020204 3 Not determined 1
nf2b NF2 ENSDARG00000025567 3 Not determined 1
ryr3 RYR3 ENSDARG00000071331 4 Not determined 1
si:ch211-114c12.5 RFPL1 ENSDARG00000092931 None Not determined 1
si:dkey-18p12.4 RFPL1 ENSDARG00000079703 1 Not determined 1
si:dkey-206d17.10 RFPL1 ENSDARG00000093290 None Not determined 1
si:dkey-206d17.7 RFPL1 ENSDARG00000013481 None Not determined 1
thoc5 THOC5 ENSDARG00000038290 2 Not determined 1
zgc:194990 RFPL1 ENSDARG00000069407 1 Not determined 1
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