GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study identifies five susceptibility loci for glioma.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
cdkn2b CDKN2B ENSDARG00000037262 2 Not determined 30
cdkn2b CDKN2A ENSDARG00000037262 2 Not determined 25
PHLDB1 (1 of 2) PHLDB1 ENSDARG00000079378 1 Not determined 4
si:ch1073-210b3.1 RTEL1 ENSDARG00000034243 None Not determined 7
si:dkey-252h13.1 PHLDB1 ENSDARG00000061093 3 Not determined 4
tert TERT ENSDARG00000042637 3 Normal 18

The following reported genes could not be linked automatically to a zebrafish gene:

  • CCDC26
  • CCDC26
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