GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide and candidate gene association study of cigarette smoking behaviors.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
actn1 ACTN1 ENSDARG00000007219 None Not determined 1
camkk1 CAMKK1 ENSDARG00000035452 3 Not determined 1
mao MAOA ENSDARG00000023712 4 Not determined 1
NP_001099135.1 CABLES1 ENSDARG00000062044 1 Not determined 6
si:ch211-127i16.2 MAOA ENSDARG00000092976 None Not determined 1
si:ch211-55i2.1 BBX ENSDARG00000012699 3 Not determined 1
si:dkeyp-81e1.5 TRPC5 ENSDARG00000060837 9 Not determined 1
trpc5 TRPC5 ENSDARG00000070504 5 Not determined 1
zgc:194737 CAMKK1 ENSDARG00000015134 4 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • AK002179
  • LOC133789
  • SET7
  • ZNF505
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