GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide interrogation of germline genetic variation associated with treatment response in childhood acute lymphoblastic leukemia.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
DGKB DGKB ENSDARG00000027724 1 Not determined 4
lmbrd2a LMBRD2 ENSDARG00000034710 2 Not determined 1
lmbrd2b LMBRD2 ENSDARG00000017312 5 Not determined 1
LOC100005846 ELMO1 ENSDARG00000055400 None Not determined 8
MAML2 MAML2 ENSDARG00000076326 3 Not determined 5
ncoa3 NCOA3 ENSDARG00000077404 4 Not determined 1
NP_998256.1 ELMO1 ENSDARG00000019258 2 Not determined 8
st8sia6 ST8SIA6 ENSDARG00000021195 3 Not determined 1
st8sia7.1 ST8SIA6 ENSDARG00000054211 2 Not determined 1
st8sia7.1p ST8SIA6 ENSDARG00000054207 None Not determined 1
zgc:123096 C2orf47 ENSDARG00000069671 1 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • IL15
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