GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

New sequence variants associated with bone mineral density.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
esr1 ESR1 ENSDARG00000004111 1 Not determined 14
LOC100000500 SOST ENSDARG00000061259 None Not determined 2
lrp4 LRP4 ENSDARG00000090535 2 Not determined 3
Q502M3_DANRE SPTBN1 ENSDARG00000036402 6 Not determined 5
sp7 SP7 ENSDARG00000019516 2 Not determined 3
SPTBN1 (1 of 2) SPTBN1 ENSDARG00000079113 4 Not determined 5
zgc:158867 C6orf97 ENSDARG00000016161 1 Not determined 8

The following reported genes could not be linked automatically to a zebrafish gene:

  • C17orf53
  • LOC344382
  • RANKL
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