GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
abhd13 ABHD13 ENSDARG00000059209 1 Not determined 1
AMOTL1 AMOTL1 ENSDARG00000019442 None Not determined 1
C12orf28 C12orf28 ENSDARG00000040581 1 Not determined 1
C5orf15 C5orf15 ENSDARG00000090747 1 Not determined 1
C7U131_DANRE PTPRD ENSDARG00000044635 3 Not determined 11
dhodh DHODH ENSDARG00000051889 1 Not determined 1
erfl1 ETV3 ENSDARG00000086892 1 Not determined 1
erfl1 ETV3L ENSDARG00000086892 1 Not determined 1
fzd7a FZD7 ENSDARG00000060004 2 Normal 1
fzd7b FZD7 ENSDARG00000027589 1 Normal 1
glt25d2 GLT25D2 ENSDARG00000014670 3 Not determined 3
gpr85 GPR85 ENSDARG00000068701 1 Not determined 1
gsx1 GSX1 ENSDARG00000035735 1 Not determined 1
KIRREL3 (2 of 3) KIRREL3 ENSDARG00000086919 None Not determined 4
kirrel3a KIRREL3 ENSDARG00000075806 3 Not determined 4
kirrel3l KIRREL3 ENSDARG00000019473 None Not determined 4
lig4 LIG4 ENSDARG00000060620 3 Not determined 1
LOC572369 KIRREL3 ENSDARG00000060939 2 Not determined 4
pawrl PAWR ENSDARG00000045486 1 Not determined 1
pdx1 PDX1 ENSDARG00000002779 4 Normal 2
pitrm1 PITRM1 ENSDARG00000038563 4 Not determined 1
PTPRD (2 of 2) PTPRD ENSDARG00000059452 6 Not determined 11
ptprdb PTPRD ENSDARG00000019945 12 Normal 11
rgl1 RGL1 ENSDARG00000005989 1 Not determined 2
si:ch211-13f8.2 GLT25D2 ENSDARG00000078299 3 Not determined 3
si:ch211-167h3.2 ATP8B1 ENSDARG00000094582 1 Not determined 3
si:ch211-180b7.2 ATP8B1 ENSDARG00000060980 9 Not determined 3
ywhaba YWHAZ ENSDARG00000013078 2 Not determined 1
ywhabb YWHAZ ENSDARG00000075758 None Not determined 1
ywhabl YWHAZ ENSDARG00000040287 1 Not determined 1
ywhai YWHAZ ENSDARG00000032575 None Not determined 1
zgc:55671 KIAA0174 ENSDARG00000051888 2 Not determined 1
zgc:86607 CWC15 ENSDARG00000013382 1 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • A2BP1
  • C16orf46
  • FLJ31818
  • FLJ39061
  • JMJD2D
  • LOC729257
  • PKD1L2
  • PKD1L3
  • SPATA8
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